In 1993, Higuchi et al(1) demonstrated
real-time or kinetic monitoring of DNA amplification. They used a conventional
PCR system rigged with an UltraViolet lamp to irradiate PCR samples containing
ethidium bromide and a camera to record the emission. Their technique revealed
that scientists could monitor the accumulation of double-stranded DNA during
PCR by measuring the increase in fluorescent emission as ethidium bromide bound
to PCR products. The critical revelation was that a linear relationship was
established between the amount of target DNA and the amount of PCR product
generated by amplification after a specific number of amplification cycles.
This technique was developed to become real-time or quantitative PCR (qPCR).
QPCR and RT-qPCR are now the techniques of choice for
identification and quantification of genomic and transcriptomic sequences. They
are used to measure gemomic sequences, viral load or bacterial pathogens in clinical
samples, RNA (via cDNA) copy numbers to determine the level of gene product in
a tissue sample, to verify microarray or RNAi data. It is also widely used in a
number of biotechnology applications, including the quantification of foreign
genes in genetically modified foods and for forensic sample identification such
as to identify victims of the 9/11 tragedies in New York.
Since Higuchi’s initial experiments, qPCR methodologies have
improved with specific detection chemistries and integrated instrumentation.
1Higuchi, R. et al. (1993)
Kinetic PCR analysis: real-time monitoring of DNA amplification reactions.
Biotechnology 11, 1026