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Phospholipase D

Phosphatidylcholine (PC)-specific phospholipase D (PLD) enzymes catalyze the hydrolysis of PC to generate choline and phosphatidic acid. These enzymes belong to a superfamily of phosphatidyltransferases with a characteristic unique duplicated catalytic domain motif, the PLD or "€œHKD"€ domain flanked by two conserved regions that are also critical for catalysis and postulated to be important for substrate recognition. PLD isoenzymes have been identified in species from bacteria to mammals. Some bacterial PLDs have broader substrate specificity than the eukaryotic enzymes and may play roles in pathogenesis. Three plant PLD isoenzymes (PLD-α, PLD-β and PLD-γ) have been identified by cDNA cloning. These differ in their dependence on calcium and phosphoinositides for activity and have been suggested to be important in membrane remodeling during development or wound repair. In budding yeast, PLD activity encoded by the spo14 gene is required for formation of the prospore membrane during meiosis and has a conditional role in regulation of secretion during vegetative growth.

Mammalian PLD enzymes are effector enzymes in signal transduction pathways initiated by heterotrimeric G protein-coupled cell surface receptors and receptor tyrosine kinases. A number of intracellular and extracellular messenger functions for phosphatidic acid have been described in mammalian cells. These include regulation of protein and lipid kinases, cell adhesion receptors; the phagocyte burst oxidase, the target of rapamycin (TOR) and guanine nucleotide exchange proteins for small GTPases. For example, phosphatidic acid activates phosphatidylinositol 4-phosphate 5-kinase, which may underlie localized synthesis of PI(4,5)P2 linked to membrane ruffling in the plasma membrane of growth factor stimulated cells or effects on membrane transport and exocytosis, while activation of the Raf protein kinase and TOR by this lipid may link PLD activation to control of cell proliferation and survival. Phosphatidic acid can also be metabolized by dephosphorylation to produce diacylglycerol for activation of PKC isoenzymes or deacylated by phospholipase A2 to generate lyso-phosphatidic acid which is active at cell surface receptors. The downstream pathways regulated by PLD1 and PLD2 suggest roles in disease states including cancer, inflammation, cardiovascular disease and diabetes. However although some evidence for aberrant disease-specific expression and regulation of PLD activity has been presented, a defined role for PLD1 or PLD2 in these disease states has not yet been established.

With the possible exception of the unidentified enzyme responsible for a fatty acid stimulated PLD activity, two mammalian PLD gene products, PLD1 and PLD2 account for the PLD activities described in mammalian cells and tissues. PLD1 and PLD2 are ubiquitously expressed although relative levels of the two enzymes vary considerably between cell types. PLD1 and PLD2 display cell type specific and dynamically regulated differences in localization between the plasma membrane and intracellular membranes. Control of PLD1 activity by protein and lipid modulators is complex. Both in vitro and intact cell studies suggest roles for GTP-binding proteins of the ADP-ribosylation (ARF) and Rho families and PKC in this process. PLD2 is insensitive to these activators and activity of this enzyme may be controlled by mechanisms involving protein inhibitors that have been identified using in vitro assays. These include fodrin, synaptojanin, clathrin assembly protein-3 and synucleins.

PLD enzymes operate by an ordered bisubstrate or "ping-pong" mechanism with a covalent enzyme-phosphatidic acid intermediate. Primary alcohols can substitute for water in the product release step of the reaction cycle and, in this case, the enzyme catalyzes a transphosphatidylation reaction forming a metabolically stable phosphatidyl-alcohol. This reaction is highly efficient. In the absence of specific inhibitors of PLD enzyme activity, primary alcohols have therefore been used to antagonize PLD signaling by inhibiting phosphatidic acid production and promoting formation of phosphatidylalcohols, which are presumed to be inert in intact cells. A widely used inhibitor of conventional PKC enzymes, calphostin-c, is a potent direct inhibitor of PLD1 and PLD2 with less dramatic effects on the activity of plant and bacterial PLDs.


The Table below contains accepted modulators and additional information. For a list of additional products, see the "Similar Products" section below.


Class Bacterial

Streptomyces (P0065) Corynebacterium PLD-α PLD-β PLD-γ
Molecular Weight (kDa) 59.0 33.6 92.0 108.6 95.5
Substrate Specificity PC (P3556)
SM (S0756)
Lyso-PC (L1381)
Not Known
PC (P3556)
PC (P3556) PC (P3556)
Metal Ion Dependence Ca2+, Mg2+
Ca2+, Mg2+
Ca2+ (mM), Mg2+
Ca2+ (µM), Mg2+
Ca2+ (µM), Mg2+
Activators/Cofactors Not Known
Not Known
Not Known
Not Known
PI(4,5)P2 (P9763)
Protein Inhibitors
    Not Known
Not Known
Small Molecule Inhibitors (not specific)     Not Known
Not Known
Ceramides (C2137)
Primary alcohols
Calphostin-c (C6303)
Tissue Expression NR NR Vegetative Tissues
Vegetative Tissues
Vegetative Tissues
Physiological Function Pathogenesis Pathogenesis Stress responses
Stress responses
Stress responses
Disease Relevance NR NR Wound healing, response to pathogens, freezing tolerance Wound healing, response to pathogens, freezing tolerance
Wound healing, response to pathogens, freezing tolerance



Class Yeast

spo14p ScPLD2 PLD1 PLD2 Fatty acid dependent PLD
Molecular Weight (kDa) 195.2 ND 124.2 (1a), 118.7 (1b)
106.1 ND
Substrate Specificity PC (P3556) PS (P5660, P6641, P7769) >
PE (P7693) >
PC (P3556)
PC (P3556) PC (P3556) PC (P3556)
Metal Ion Dependence Inhibited by Mg2+ Not Known
Ca2+, Mg2+
Ca2+, Mg2+ Ca2+, Mg2+
Activators/Cofactors PI(4,5)P2 (P9763) Not Known
PI(4,5)P2 (P9763) Free fatty acids
Not Known
Protein Inhibitors
    Synuclein (S7820)
Not Known
Not Known
Small Molecule Inhibitors (not specific)     Not Known
Not Known
Tissue Expression Increased in meiosis Not Known Ubiquitous Ubiquitous Not Known
Physiological Function Meiosis, secretion Not Known Signaling/membrane trafficking
Signaling/membrane trafficking Not Known
Disease Relevance NR NR Inflammation, cardiovascular disease, cancer, diabetes
Inflammation, cardiovascular disease, cancer, diabetes Not Known



AP3: Clathrin assembly protein-3
ARF: ADP-ribosylation factor family GTP-binding proteins
Lyso-PC: Lyso-Phosphatidylcholine
ND: Not determined
PE: Phosphatidylethanolamine
PLD: Phosphatidylcholine-specific phospholipase D
spo14p: S. cerevisiae spo14 gene product
PC: Phosphatidylcholine
PI(4,5)P2: Phosphatidylinositol 4,5-biphosphate
PS: Phosphatidylserine
Rho: Rho family GTP-binding proteins
SM: Sphingomyelin
NR: Not relevant


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