Skip to Content
Merck

Short peptides self-assemble to produce catalytic amyloids.

Nature chemistry (2014-03-22)
Caroline M Rufo, Yurii S Moroz, Olesia V Moroz, Jan Stöhr, Tyler A Smith, Xiaozhen Hu, William F DeGrado, Ivan V Korendovych
ABSTRACT

Enzymes fold into unique three-dimensional structures, which underlie their remarkable catalytic properties. The requirement to adopt a stable, folded conformation is likely to contribute to their relatively large size (>10,000 Da). However, much shorter peptides can achieve well-defined conformations through the formation of amyloid fibrils. To test whether short amyloid-forming peptides might in fact be capable of enzyme-like catalysis, we designed a series of seven-residue peptides that act as Zn(2+)-dependent esterases. Zn(2+) helps stabilize the fibril formation, while also acting as a cofactor to catalyse acyl ester hydrolysis. These results indicate that prion-like fibrils are able to not only catalyse their own formation, but they can also catalyse chemical reactions. Thus, they might have served as intermediates in the evolution of modern-day enzymes. These results also have implications for the design of self-assembling nanostructured catalysts including ones containing a variety of biological and non-biological metal ions.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Carbonic Anhydrase from bovine erythrocytes, ≥95% (SDS-PAGE), specific activity ≥3,500 W-A units/mg protein, lyophilized powder
Sigma-Aldrich
Zinc, powder, <150 μm, 99.995% trace metals basis
Sigma-Aldrich
Zinc, mossy, ≥99%
Sigma-Aldrich
Carbonic Anhydrase I from human erythrocytes
Supelco
Carbonic Anhydrase I from human erythrocytes, Isoelectric focusing marker, pI 6.6
Sigma-Aldrich
Carbonic Anhydrase from bovine erythrocytes, non-denaturing PAGE marker
Sigma-Aldrich
Carbonic Anhydrase from bovine erythrocytes, BioReagent, suitable for GFC marker
Sigma-Aldrich
Carbonic Anhydrase from bovine erythrocytes, lyophilized powder, ≥2,000 W-A units/mg protein
Sigma-Aldrich
Carbonic Anhydrase from bovine erythrocytes, For use as a marker in SDS-PAGE
Sigma-Aldrich
Zinc, purum, powder
Sigma-Aldrich
Zinc, wire, diam. 1.0 mm, 99.995% trace metals basis
Sigma-Aldrich
Zinc, foil, thickness 0.25 mm, 99.9% trace metals basis
Sigma-Aldrich
Zinc, granular, 30-100 mesh, 99%
Zinc, wire reel, 1m, diameter 2.0mm, 99.99+%
Zinc, wire reel, 25m, diameter 0.05mm, as drawn, 99%
Zinc, wire reel, 2m, diameter 0.125mm, as drawn, 99%
Zinc, wire reel, 50m, diameter 3.0mm, extruded, 99.9%
Zinc, wire reel, 0.2m, diameter 1.0mm, 99.999%
Zinc, wire reel, 20m, diameter 1.0mm, extruded, 99.9%
Zinc, wire reel, 0.5m, diameter 2.0mm, 99.99+%
Zinc, wire reel, 5m, diameter 0.25mm, as drawn, 99.99+%
Zinc, wire reel, 1m, diameter 0.025mm, as drawn, 99%
Zinc, wire reel, 0.2m, diameter 6.35mm, 99.99+%
Zinc, wire reel, 20m, diameter 3.0mm, extruded, 99.9%
Zinc, wire reel, 2m, diameter 2.0mm, 99.99+%
Zinc, wire reel, 1m, diameter 0.5mm, as drawn, 99.99+%
Zinc, wire reel, 25m, diameter 0.25mm, as drawn, 99.99+%
Zinc, wire reel, 0.5m, diameter 1.0mm, 99.99+%
Zinc, wire reel, 5m, diameter 0.5mm, as drawn, 99.99+%
Zinc, wire reel, 1m, diameter 0.05mm, as drawn, 99%