SYBR Green qPCR is utilized to determine the relative silencing effect of specific shRNAs. The term "validated" refers to shRNA sequences that have been tested and confirmed effective in silencing. This validation involves testing in specific cell lines and measuring the mean knockdown level through lentiviral transduction. The evaluation of knockdown is conducted by measuring mRNA transcript levels post-lentiviral transduction with SYBR Green qPCR and comparing these levels to those achieved with the MISSION pLKO.1-puro Control Transduction Particles (SHC001V). For instance, a mean knockdown level of 0.90 indicates a 90% reduction at the mRNA level. Typically, validation does not extend to the protein level, as the primary target of shRNA is mRNA expression, which subsequently influences protein expression.
General description
Application
- in the generation of ZO-1 (zonula occludens-1) knockdown
- to knock down LIF (leukemia inhibitory factor) expression in isogenic MCF10 model
- to knock down nuclear factor erythroid 2 like 1, in n MIN6 pancreatic β-cells
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Articles
MISSION shRNA reduce the expression of specific target genes by targeting the specific mRNA therefore reducing the corresponding protein expression.
RNAi Consortium (TRC): Collaborative effort among academic labs and biotech/pharma institutes advancing RNA interference research.
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Find shRNAs for Individual Genes. Over 150,000 pre-cloned shRNA constructs targeting more than 15,000 human and 15,000 mouse genes.
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| SKU | GTIN |
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| SHCLND | 04061835574056 |
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How is the knockdown measured for validated shRNA clones?
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