Skip to Content
Merck

Dye affinity cryogels for plasmid DNA purification.

Materials science & engineering. C, Materials for biological applications (2015-08-08)
Duygu Çimen, Fatma Yılmaz, Işık Perçin, Deniz Türkmen, Adil Denizli
ABSTRACT

The aim of this study is to prepare megaporous dye-affinity cryogel discs for the purification of plasmid DNA (pDNA) from bacterial lysate. Poly(hydroxyethyl methacrylate) [PHEMA] cryogel discs were produced by free radical polymerization initiated by N,N,N',N'-tetramethylene diamine (TEMED) and ammonium persulfate (APS) redox pair in an ice bath. Cibacron Blue F3GA was used as an affinity ligand (loading amount: 68.9μmol/g polymer). The amount of pDNA adsorbed onto the PHEMA-Cibacron Blue F3GA cryogel discs first increased and then reached a plateau value (i.e., 32.5mg/g cryogel) at 3.0mg/mL pDNA concentration. Compared with the PHEMA cryogel (0.11mg/g cryogel), the pDNA adsorption capacity of the PHEMA-Cibacron Blue F3GA cryogel (32.4mg/g polymer) was improved significantly due to the Cibacron Blue 3GA immobilization onto the polymeric matrix. pDNA adsorption amount decreased from 11.7mg/g to 1.1mg/g with the increasing of NaCl concentration. The maximum pDNA adsorption was achieved at 4°C. The overall recovery of pDNA was calculated as 90%. The PHEMA-Cibacron Blue F3GA cryogel discs could be used five times without decreasing the pDNA adsorption capacity significantly. The results show that the PHEMA-Cibacron Blue F3GA cryogel discs promise high selectivity for pDNA.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Adenosine 5′-phosphosulfate sodium salt, ≥85%
Sigma-Aldrich
2-Hydroxyethyl methacrylate
Sigma-Aldrich
2-Hydroxyethyl methacrylate, contains ≤250 ppm monomethyl ether hydroquinone as inhibitor, 97%
Sigma-Aldrich
2-Hydroxyethyl methacrylate, ≥99%, contains ≤50 ppm monomethyl ether hydroquinone as inhibitor
Sigma-Aldrich
N,N,N′,N′-Tetramethylethylenediamine, ReagentPlus®, 99%
Sigma-Aldrich
Hydroquinone, meets USP testing specifications
Sigma-Aldrich
Ammonium persulfate, BioXtra, ≥98.0%
Sigma-Aldrich
Ammonium persulfate, BioUltra, ≥98.0% (RT)
Sigma-Aldrich
Ammonium persulfate, Molecular Biology, suitable for electrophoresis, ≥98%
Sigma-Aldrich
N,N,N′,N′-Tetramethylethylenediamine, BioReagent, Molecular Biology, ≥99% (GC)
Sigma-Aldrich
N,N,N′,N′-Tetramethylethylenediamine, BioReagent, suitable for electrophoresis, ≥99.0%
Sigma-Aldrich
N,N,N′,N′-Tetramethylethylenediamine, ≥99.5%, purified by redistillation
Sigma-Aldrich
Hydroquinone, ReagentPlus®, 99%
Sigma-Aldrich
Hydroquinone, ReagentPlus®, ≥99%