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A4018

Agarose, low gelling temperature

Synonym(s):

2-Hydroxyethyl agarose

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About This Item

CAS Number:
UNSPSC Code:
41105317
NACRES:
NA.21
MDL number:
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biological source

algae (marine)

Quality Segment

form

powder

technique(s)

cell culture | mammalian: suitable

EEO

≤0.10

transition temp

congealing temperature 26-30 °C

gel strength

≥200 g/cm2 (1% gel)

SMILES string

O1[C@H]([C@@H]([C@H]([C@H]([C@H]1CO)O)O[C@@H]4O[C@@H]5[C@H]([C@@H](OC5)[C@@H]4O)O[C@@H]6O[C@@H]([C@@H]([C@@H]([C@H]6O)O)O)CO)O)O[C@H]2[C@H]3OC[C@@H]2O[C@H]([C@H]3O)O

InChI

1S/C24H38O19/c25-1-5-9(27)11(29)12(30)22(38-5)41-17-8-4-36-20(17)15(33)24(40-8)43-18-10(28)6(2-26)39-23(14(18)32)42-16-7-3-35-19(16)13(31)21(34)37-7/h5-34H,1-4H2/t5-,6-,7+,8+,9+,10+,11+,12-,13+,14-,15+,16-,17-,18+,19+,20+,21-,22+,23+,24+/m1/s1

InChI key

MJQHZNBUODTQTK-WKGBVCLCSA-N

General description

Agarose is a polymer extracted from agar or agar-bearing marine algae. This purified linear galactan hydrocolloid comprises alternating co-polymers D-galactose and 3,6-anhydro-L-galactose units connected by α-(1→3) and β-(1→4) glycosidic bonds. Agarose is highly biocompatible and possesses variable mechanical and diffusion properties. Agarose can be used as a gelling agent, to separate nucleic acids electrophoretically. Low melting or low gelling temperature agarose is produced by hydroxyethylation of agarose. It is usually used for the isolation of separated DNA fragments. DNA fragments of the equal size will take longer time to move through a low melting agarose gel compared to a standard agarose gel.

Application

Gels exhibit excellent clarity and are particularly useful for the preparation of media containing heat-labile materials. Recommended for preparation of agarose beads.
Agarose, low gelling temperature has been used:
  • to immobilize zebra fish embryos during in vivo imaging experiments
  • as a constituent of defined medium to culture bovine nucleus pulposus (NP) cells
  • as a hydrogel, a scaffolding material for dental pulp regeneration
  • in the form of pellets to determine the surface pH and conductivity of an acrylic emulsion film

Analysis Note

A low gelling temperature derivative with unique gelling properties.
The following is a list of properties associated with our agaroses:
Sulfate content - used as an indicator of purity, since sulfate is the major ionic group present.
Gel strength - the force that must be applied to a gel to cause it to fracture.
Gel point - the temperature at which an aqueous agarose solution forms a gel as it cools. Agarose solutions exhibit hysteresis in the liquid-to-gel transition - that is, their gel point is not the same as their melting temperature.
Electroendosmosis (EEO) - a movement of liquid through the gel. Anionic groups in an agarose gel are affixed to the matrix and cannot move, but dissociable counter cations can migrate toward the cathode in the matrix, giving rise to EEO. Since electrophoretic movement of biopolymers is usually toward the anode, EEO can disrupt separations because of internal convection.

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This Item
A9045A9414A0701
description

-

description

BioReagent, suitable for cell culture, suitable for insect cell culture, suitable for plant cell culture

description

BioReagent, Molecular Biology

description

Type VII-A

gel strength

≥200 g/cm2 (1% gel)

gel strength

≥200 g/cm2 (1% gel)

gel strength

≥200 g/cm2 (1% gel)

gel strength

≥250 g/cm2 (1% gel)

form

powder

form

powder

form

powder

form

powder

EEO

≤0.10

EEO

≤0.1

EEO

≤0.10

EEO

≤0.12

Quality Level

200

Quality Level

200

Quality Level

200

Quality Level

200

technique(s)

cell culture | mammalian: suitable

technique(s)

cell culture | insect: suitable, cell culture | plant: suitable, cell culture | mammalian: suitable

technique(s)

-

technique(s)

electrophoresis: suitable

biological source

algae (marine)

biological source

-

biological source

algae (red)

biological source

-


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Storage Class

11 - Combustible Solids

wgk

WGK 3

flash_point_f

Not applicable

flash_point_c

Not applicable

ppe

Eyeshields, Gloves, type N95 (US)



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Questions

1–3 of 3 Questions  
  1. How can I determine the shelf life / expiration / retest date of this product?

    1 answer
    1. If this product has an expiration or retest date, it will be shown on the Certificate of Analysis (COA, CofA). If there is no retest or expiration date listed on the product's COA, we do not have suitable stability data to determine a shelf life. For these products, the only date on the COA will be the release date; a retest, expiration, or use-by-date will not be displayed.
      For all products, we recommend handling per defined conditions as printed in our product literature and website product descriptions. We recommend that products should be routinely inspected by customers to ensure they perform as expected.
      For products without retest or expiration dates, our standard warranty of 1 year from the date of shipment is applicable.
      For more information, please refer to the Product Dating Information document: https://www.sigmaaldrich.com/deepweb/assets/sigmaaldrich/marketing/global/documents/418/501/product-dating-information-06-25-mk.pdf

      Helpful?

  2. How is shipping temperature determined? And how is it related to the product storage temperature?

    1 answer
    1. Products may be shipped at a different temperature than the recommended long-term storage temperature. If the product quality is sensitive to short-term exposure to conditions other than the recommended long-term storage, it will be shipped on wet or dry-ice. If the product quality is NOT affected by short-term exposure to conditions other than the recommended long-term storage, it will be shipped at ambient temperature. As shipping routes are configured for minimum transit times, shipping at ambient temperature helps control shipping costs for our customers. For more information, please refer to the Storage and Transport Conditions document: https://www.sigmaaldrich.com/deepweb/assets/sigmaaldrich/marketing/global/documents/316/622/storage-transport-conditions-mk.pdf

      Helpful?

  3. In order to have sterile Low Melting Agarose, once the package has already been opened outside of sterile conditionds, should I filter it and then lyophilize or should I use an autoclave?

    1 answer
    1. Agarose solutions can be autoclaved.

      Helpful?

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