Expansion Microscopy for Cell Biology Analysis in Fungi.

Frontiers in microbiology (2020-04-23)
Ralph Götz, Sabine Panzer, Nora Trinks, Janna Eilts, Johannes Wagener, David Turrà, Antonio Di Pietro, Markus Sauer, Ulrich Terpitz

Super-resolution microscopy has evolved as a powerful method for subdiffraction-resolution fluorescence imaging of cells and cellular organelles, but requires sophisticated and expensive installations. Expansion microscopy (ExM), which is based on the physical expansion of the cellular structure of interest, provides a cheap alternative to bypass the diffraction limit and enable super-resolution imaging on a conventional fluorescence microscope. While ExM has shown impressive results for the magnified visualization of proteins and RNAs in cells and tissues, it has not yet been applied in fungi, mainly due to their complex cell wall. Here we developed a method that enables reliable isotropic expansion of ascomycetes and basidiomycetes upon treatment with cell wall degrading enzymes. Confocal laser scanning microscopy (CLSM) and structured illumination microscopy (SIM) images of 4.5-fold expanded sporidia of Ustilago maydis expressing fluorescent fungal rhodopsins and hyphae of Fusarium oxysporum or Aspergillus fumigatus expressing either histone H1-mCherry together with Lifeact-sGFP or mRFP targeted to mitochondria, revealed details of subcellular structures with an estimated spatial resolution of around 30 nm. ExM is thus well suited for cell biology studies in fungi on conventional fluorescence microscopes.

Product Number
Product Description

Potato Dextrose Broth, suitable for microbiology, NutriSelect® Basic
Sodium chloride, BioReagent, suitable for cell culture, suitable for insect cell culture, suitable for plant cell culture, ≥99%
Sodium acrylate, 97%
N,N,N′,N′-Tetramethylethylenediamine, BioReagent, for molecular biology, ≥99% (GC)
Ethylenediaminetetraacetic acid dipotassium salt dihydrate, ≥98%
Acrylamide/Bis-acrylamide, 40% solution, BioReagent, suitable for electrophoresis, 19:1
Ammonium persulfate, for molecular biology, suitable for electrophoresis, ≥98%
Guanidine hydrochloride, BioUltra, for molecular biology, ≥99.5% (AT)
Anti-Rabbit-IgG - Atto 647N antibody produced in goat, 1 mg/mL IgG